The Zvariant class

Zvariant class represents a Zonation analysis variant with the associated parameters.

Details

Currently Zvariant must be instantiated based on an existing Zonation batch file. If the variant has been run, then the results are also associated with the instance of Zvariant-class.

Slots

name:

Character string name of the variant.

bat.file:

Character string path to a Zonation-style batch file.

dat.data:

List holding the parsed data from Zonation dat-file

spp.data:

Data frame holding the parsed data from Zonation spp-file

output.dir:

Character string path to the output directory.

groups:

Data frame holding the parsed data from Zonation groups-file

call.params:

List of parsed call parameters from the batch file.

condition.layers:

Data frame holding the parsed data from condition file.

results:

List holding the results (data frames).

results_dirty:

Logical indicating if the current object data (dat.data and spp.data) has been changed when results are present. If TRUE, data has changed and results may have been produced using different data.